force-directed d3.js add edge labels - javascript

I want to visualize a graph in d3js with the force-directed layout. I have been following this question, but I don't get it to work.
I created an jsfiddle, which can be found here.
However, now the lines are not working, but the labels are how they should be. Oddly, when I execute it locally it is working but someday lines are shown twice, like this:
<g class="link-g">
<line class="link" x1="297.0210832552382" y1="122.48446414068198" x2="245.8066880510027" y2="240.1061616356794"></line>
<text>interaction</text>
<text x="271.4138856531205" y="181.2953128881807">interaction</text>
</g>
Anyway, what I do is the following. First the link and linktext.
var link = svg.selectAll(".link")
.data(links, function(d) {
return d.source.id + '-' + d.target.id;
});
link.enter()
.append("g")
.attr("class","link-g")
.append("line")
.attr("class", "link");
link.exit().remove();
var linktext = svg.selectAll(".link-g")
.append("text")
.text("label");
Then in the tick():
link.attr("x1", function(d) {
return d.source.x;
})
.attr("y1", function(d) {
return d.source.y;
})
.attr("x2", function(d) {
return d.target.x;
})
.attr("y2", function(d) {
return d.target.y;
});
What am I doing wrong? Thanks.

You add attributes x1, x2, y1, y2 on the svg:g element instead of the line, that's why there is no visible links.
If you check the code : svg:g elements have good values, and line got no attribute.
Create a new variable to store your links, and add attributes on this variable:
var linkLine = link.enter()
.append("g")
.attr("class","link-g")
.append("line")
.attr("class", "link");
And update tick function
function tick(){
linkLine.attr("x1", function(d) {
return d.source.x;
})
/* ... (others attr) ... */
}

Related

D3 - Append SVG inside SVG

I have been trying to append a set of SVGs inside SVG. So, in inside SVG, I want to create a function to make plot. However, this doesn't work in the way I expected as the inside SVGs don't have the dimension according to my specification. So, I'd like to know what went wrong.
svg_g_g = svg_g.append("g")
.selectAll("g")
.data(data)
.enter()
.append("g")
.attr("transform", function(d) {
return "translate(" + xScale(d.key) + "," + lift + ")"
})
.append("svg")
.attr("width", function(d) { return xScale(d.key) })
.attr("height", height)
.append("line")
.style("stroke", "black")
.attr("x1", function(d) { return xScale(d.key) })
.attr("y1", height-100)
.attr("x2", function(d) { return xScale(d.key) + 50 } )
.attr("y2", height-100);
This is the output.
While if I bind data to g (without appending svg), the result looks more promising.
svg_g_g = svg_g.append("g");
svg_g_g.selectAll("line")
.data(data)
.enter()
.append("line")
.style("stroke", "black")
.attr("x1", function(d) { return xScale(d.key) })
.attr("y1", height-100)
.attr("x2", function(d) { return xScale(d.key) + 50 } )
.attr("y2", height-100);
and this is the result. (notice: the lines were shown in this case)
Any help will be appreciated.
edit: what I intended to do was I wanted to create a box-plot, I used "iris" dataset here as I can compared it against other data visualisation libraries. The current state I tried to create a SVG with an equal size for each category which I would use to contain box-plot. In other words, after I can create internal SVGs successfully, I will call a function to make the plot from there. Kinda same idea Mike did here.

How to add text labels on edges [duplicate]

I have created a force directed graph but I'm unable to add text to the links created.
How can I do so?
Following is my code link
I have used the following line to append the titles on the link's, but its not coming.
link.append("title")
.text(function (d) {
return d.value;
});
What am I doing wrong with this ?
This link contains the solution that you need.
The key point here is that "title" adds tooltip. For label, you must provide slightly more complex (but not overly complicated) code, like this one from the example from the link above:
// Append text to Link edges
var linkText = svgCanvas.selectAll(".gLink")
.data(force.links())
.append("text")
.attr("font-family", "Arial, Helvetica, sans-serif")
.attr("x", function(d) {
if (d.target.x > d.source.x) {
return (d.source.x + (d.target.x - d.source.x)/2); }
else {
return (d.target.x + (d.source.x - d.target.x)/2); }
})
.attr("y", function(d) {
if (d.target.y > d.source.y) {
return (d.source.y + (d.target.y - d.source.y)/2); }
else {
return (d.target.y + (d.source.y - d.target.y)/2); }
})
.attr("fill", "Black")
.style("font", "normal 12px Arial")
.attr("dy", ".35em")
.text(function(d) { return d.linkName; });
The idea of the code is simple: It calculates the midpoint of the link, and displays some text at that place (you can decide what that text actually is). There are some additional calculations and conditions, you can figure it out from the code, however you'll anyway want to change them depending on your needs and aesthetics.
EDIT: Important note here is that "gLink" is the name of the class of links, previously defined with this code:
// Draw lines for Links between Nodes
var link = svgCanvas.selectAll(".gLink")
.data(force.links())
In your example, it may be different, you need to adjust the code.
Here is a guide how to incorporate solution from example above to another example of force layout that doesn't have link labels:
SVG Object Organization and Data Binding
In D3 force-directed layouts, layout must be supplied with array of nodes and links, and force.start() must be called. After that, visual elements may be created as requirements and desing say. In our case, following code initializes SVG "g" element for each link. This "g" element is supposed to contain a line that visually represent link, and the text that corresponds to that link as well.
force
.nodes(graph.nodes)
.links(graph.links)
.start();
var link = svg.selectAll(".link")
.data(graph.links)
.enter()
.append("g")
.attr("class", "link")
.append("line")
.attr("class", "link-line")
.style("stroke-width", function (d) {
return Math.sqrt(d.value);
});
var linkText = svg.selectAll(".link")
.append("text")
.attr("class", "link-label")
.attr("font-family", "Arial, Helvetica, sans-serif")
.attr("fill", "Black")
.style("font", "normal 12px Arial")
.attr("dy", ".35em")
.attr("text-anchor", "middle")
.text(function(d) {
return d.value;
});
"g" elements have class "link", lines have class "link-line", ad labels have class "link-label". This is done so that "g" elements may be easily selected, and lines and labels can be styled in CSS file conveninetly via classes "link-line" and "link-label" (though such styling is not used in this example).
Initialization of positions of lines and text is not done here, since they will be updated duting animation anyway.
Force-directed Animation
In order for animation to be visible, "tick" function must contain code that determine position of lines and text:
link.attr("x1", function (d) { return d.source.x; })
.attr("y1", function (d) { return d.source.y; })
.attr("x2", function (d) { return d.target.x; })
.attr("y2", function (d) { return d.target.y; });
linkText
.attr("x", function(d) {
return ((d.source.x + d.target.x)/2);
})
.attr("y", function(d) {
return ((d.source.y + d.target.y)/2);
});
Here is the resulting example: plunker

D3 Multiple Force Directed Graphs

I can't multiple D3 force directed graphs to appear on one page, as they all pile into the same svg for whatever reason. I am out of ideas, and I have tried the top ideas online, which generally center around making sure you have a unique div to place each in, which I do.
I have divs with ids occurrences5, occurrences5...etc. So the loop should correctly find each div. The names of the JSON files are the same as the ids for each div.
var color = d3.scale.category20();
var occurences = ["occurrences3", "occurrences5", "occurrences10","occurrences20"];
for (var i = 0; i < occurences.length; i++) {
var occurence = occurences[i];
var svg = d3.select("#" + occurence).append("svg")
.attr("width", width)
.attr("height", height)
.attr("id", "#" + occurence + "svg");
d3.json(occurence + ".json", function(error, graph) {
if (error) throw error;
var force = d3.layout.force()
.charge(-120)
.linkDistance(30)
.size([width, height]);
force
.nodes(graph.nodes)
.links(graph.links)
.start();
var link = svg.selectAll(".link")
.data(graph.links)
.enter().append("line")
.attr("class", "link")
.style("stroke-width", function(d) { return Math.sqrt(d.value); });
var node = svg.selectAll(".node")
.data(graph.nodes)
.enter().append("circle")
.attr("class", "node")
.attr("r", 5)
.style("fill", function(d) { return color(d.group); })
.call(force.drag);
node.append("title")
.text(function(d) { return d.name; });
force.on("tick", function() {
link.attr("x1", function(d) { return d.source.x; })
.attr("y1", function(d) { return d.source.y; })
.attr("x2", function(d) { return d.target.x; })
.attr("y2", function(d) { return d.target.y; });
node.attr("cx", function(d) { return d.x; })
.attr("cy", function(d) { return d.y; });
});
});
}})
You need to set svg within the callback function(error, graph) you pass to d3.json and not outside it
Reason: the callback function you pass to d3.json is called asynchronously i.e. it won't run nicely once per iteration as you're looping through the occurrences array. It appears all 4 callbacks are returning after that loop has finished and thus svg is set to the last value it had in that loop, thus everything's getting added to that svg element.
If I separate the creation of each chart into their own function() blocks, it works. I got my answer from: D3 Dimple - How to show multiple dimple charts on same page?
However, you can separate into a function like so:
var occurences = ["occurrences3", "occurrences5", "occurrences10","occurrences20"];
occurences.forEach(function(entry) {
draw(entry);
});
function draw(occurence) {...

d3.js replace circle with a foreignObject

i played with this example of a force directed graph layout.
www.bl.ocks.org/GerHobbelt/3071239
or to manipulate directly, here with fiddle,
http://jsfiddle.net/BeSAb/
what i want was to replace the circle element
node = nodeg.selectAll("circle.node").data(net.nodes, nodeid);
node.exit().remove();
node.enter().append("circle")
.attr("class", function(d) { return "node" + (d.size?"":" leaf"); })
.attr("r", function(d) { return d.size ? d.size + dr : dr+1; })
.attr("cx", function(d) { return d.x; })
.attr("cy", function(d) { return d.y; })
.style("fill", function(d) { return fill(d.group); })
.on("click", function(d) {
console.log("node click", d, arguments, this, expand[d.group]);
expand[d.group] = !expand[d.group];
init();
});
with a group (g) element that contains a svg foreignObject
node = nodeg.selectAll("g.node").data(net.nodes, nodeid);
node.exit().remove();
var nodeEnter = node.enter().append("foreignObject")
//simplified for this demo
.attr("class", function(d) { return "node" + (d.size?"":" leaf"); })
.attr('width', '22px')
.attr('height', '22px')
.attr('x', -11)
.attr('y', -11)
.append('xhtml:div')
.style("background",function(d){return fill(d.group)})
.style("width","20px")
.style("height","20px")
.style("padding","2px")
.on("click", function(d) {
console.log("node click", d, arguments, this, expand[d.group]);
expand[d.group] = !expand[d.group];
init();
});
The Graph is build correct but if i try to expand a node by clicking it, it seems that the graph isn't updated. So that all old nodes are duplicated.
i make an other Fiddle where you can show this problem by clicking a node.
http://jsfiddle.net/xkV4b/
does anyone know what i forgot, or what the issue is?
Thank you very much!
Your enter append should probably match your selection on nodeg. But even then it appears that d3 has some trouble selecting 'foreignObject' things. That may be a question/issue to bring up on the d3 google group - it may be a bug.
However you can get around it by just selecting on the class. I updated the code to read:
node = nodeg.selectAll(".fo-node").data(net.nodes, nodeid);
node.exit().remove();
var nodeEnter = node.enter().append("foreignObject")
.attr("class", function(d) { return "fo-node node" + (d.size?"":" leaf"); })
.attr('width', '22px')
...
Which seems to work.

Setting up D3 force directed graph

To the esteemed readers. I'm reasonably new in javascript and I have come across this problem. I'm trying to implement a modified version of this force directed graph:
http://mbostock.github.com/d3/ex/force.html
The json data is generated on the fly from a php script. The idea is to color all lines connecting to one specific node ( defined in a php script) in one color and all the others in shades of gray. I'm attempting to do it by matching the source variable in the json file to the variable from the php script and changing color when that is true like this:
var link = svg.selectAll("line.link")
.data(json.links)
.enter().append("line")
.attr("class", "link")
.style("stroke-width", function(d) { return Math.sqrt(d.value);})
.style("stroke-opacity", function(d) { return d.value/10;})
.style("stroke", function(d) {
x = (tested == d.source) ? return '#1f77b4' : '#707070';// <-- Attempt to change the color of the link when this is true.
})
however this does not work. The script works fine but without the color change if I just do this
var link = svg.selectAll("line.link")
.data(json.links)
.enter().append("line")
.attr("class", "link")
.style("stroke-width", function(d) { return Math.sqrt(d.value);})
.style("stroke-opacity", function(d) { return d.value/10;})
.style("stroke", function(d) {
return '#707070';
})
I've been staring at this for days trying to figure out to get this done and I'm stuck. Any help would be greatly appreciated!!
Here is my complete script
<script type="text/javascript">
var width = 1200,
height = 1200;
var color = d3.scale.category20();
var tested=<?php echo $tested_source;?>; //<-- the variable from php
var svg = d3.select("#chart").append("svg")
.attr("width", width)
.attr("height", height);
d3.json("data.json", function(json) {
var force = d3.layout.force()
.charge(-130)
.linkDistance(function(d) { return 500-(50*d.value);})
.size([width, height]);
force
.nodes(json.nodes)
.links(json.links)
.start();
var link = svg.selectAll("line.link")
.data(json.links)
.enter().append("line")
.attr("class", "link")
.style("stroke-width", function(d) { return Math.sqrt(d.value);})
.style("stroke-opacity", function(d) { return d.value/10;})
.style("stroke", function(d) {
x = (tested == d.source) ? return '#1f77b4' : '#707070'; //<-- Attempt to change the color of the link when this is true. But is is not working... :(
})
var node = svg.selectAll("circle.node")
.data(json.nodes)
.enter().append("circle")
.attr("class", "node")
.attr("r", 12)
.style("fill", function(d) { return color(d.group); })
.call(force.drag);
node.append("title")
.text(function(d) { return d.name; });
force.on("tick", function() {
link.attr("x1", function(d) { return d.source.x; })
.attr("y1", function(d) { return d.source.y; })
.attr("x2", function(d) { return d.target.x; })
.attr("y2", function(d) { return d.target.y; });
node.attr("cx", function(d) { return d.x; })
.attr("cy", function(d) { return d.y; });
});
});
</script>
d.source is an object, you can't use == to determine if tested is a similar object. Have a look at this answer for more details on object equality.
If you want to test for a specific value of the d.source object described below, which I assume you want, you need to specify it.
Here is the source object architecture : (I'm using the example you pointed so the data comes from the miserables.json)
source: Object
group: 4
index: 75
name: "Brujon"
px: 865.6440689638284
py: 751.3426708796574
weight: 7
x: 865.9584580575608
y: 751.2658636251376
Now, here is the broken part in your code :
x = (tested == d.source) ? return '#1f77b4' : '#707070';// <-- Attempt to change the color of the link when this is true.
It doesn't work because the return is misplaced.
You're mixing ternary and return statements but you don't put them in the right order :
return test ? value_if_true : value_if_false;
if you want to assign the value to x anyway, you can do
x = test ? value_if_true : value_if_false;
return x;
You should do something like this :
return (tested == d.source) ? '#1f77b4' : '#707070';// <-- Attempt to change the color of the link when this is true.
That's for the general syntax, but this won't work as is You need to pick one of the value for your test for example :
return (tested === d.source.name) ? '#1f77b4' : '#707070';
Also, if the variable from PHP is a string you should do
var tested="<?php echo $tested_source;?>"; //<-- the variable from php
and in most cases you should use json_encode to map PHP variables into javascript ones.
As a final note, I would recommend using console functions coupled with Firebug's console panel if you're using Firefox, or the Chrome Developer Tool's console panel if you're using a Chromium based browser. It would allow you to debug your code more easily.
Working code
var width = 960,
height = 500;
var color = d3.scale.category20();
var force = d3.layout.force().charge(-120).linkDistance(30).size([width, height]);
var svg = d3.select("#chart").append("svg").attr("width", width).attr("height", height);
var tested = 20;
d3.json("miserables.json", function (json) {
force.nodes(json.nodes).links(json.links).start();
var link = svg.selectAll("line.link")
.data(json.links)
.enter()
.append("line")
.attr("class", "link")
.style("stroke-width", function (d) {
return Math.sqrt(d.value);
}).style("stroke-opacity", function (d) {
return d.value / 10;
}).style("stroke", function (d) {
return (tested == d.source.index) ? '#ee3322' : '#707070'; //'#1f77b4'
});
var node = svg.selectAll("circle.node")
.data(json.nodes)
.enter()
.append("circle")
.attr("class", "node")
.attr("r", 5)
.style("fill", function (d) {
return color(d.group);
}).call(force.drag);
node.append("title").text(function (d) {
return d.name;
});
force.on("tick", function () {
link.attr("x1", function (d) {
return d.source.x;
}).attr("y1", function (d) {
return d.source.y;
}).attr("x2", function (d) {
return d.target.x;
}).attr("y2", function (d) {
return d.target.y;
});
node.attr("cx", function (d) {
return d.x;
}).attr("cy", function (d) {
return d.y;
});
});
});

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