Adding link to d3js force layout cause bad data in nodes - javascript

I am working on a d3js side project where I am using the force layout to show nodes and lines to represent a graph. I have laid out the code such that the graph can be dynamically updated. I am doing this by:
Clearing force.nodes() then force.links()
Pushing all the nodes I want to add to force.nodes()
Updating the graph (join, enter, update, exit)
Pushing all the links I want with references to the nodes in force.nodes() to force.links
Updating the graph (join, enter, update, exit)
This works as long as I only have nodes to display, but as soon as I attempt to push a link to force.links then all hell breaks loose and the two nodes end up hiding in the top left corner.
Looking at the DOM I can see the following:
As you can see, the transform/translate parameters contain NaN values. So something blew up in my face but after two days of bug hunting I suspect that I am missing something here and need to take a cold shower.
I have stripped down my code to the smallest set that can reproduce the error. Please note from it that the nodes display fine until a link is pushed into force.links. No links are being drawn, only nodes, but the act of pushing a link where it belongs is disrupting the data in the nodes. This way of updating a graph should work as per the examples I have seen.
d3.json("data/fm.json", function(error, graph) {
if (error) throw error;
function chart(elementName) {
// look for the node in the d3 layout
var findNode = function(name) {
for (var i in nodes) {
if (nodes[i]["name"] === name) return nodes[i];
};
};
var width = 960, // default width
height = 450, // default height
color = d3.scale.category10(),
force = d3.layout.force(),
nodes = force.nodes(),
links = force.links(),
vis,
runOnceFlag = true;
vis = d3.select(elementName)
.append("svg:svg")
.attr("width", width)
.attr("height", height)
.attr("id", "svg")
.attr("pointer-events", "all")
.attr("viewBox", "0 0 " + width + " " + height)
.attr("perserveAspectRatio", "xMinYMid")
.append('svg:g');
var update = function() {
var node = vis.selectAll("g.node")
.data(nodes, function (d) {
return d.name;
});
var nodeEnter = node.enter().append("g")
.attr("class", "node")
.call(force.drag);
nodeEnter.append("svg:circle")
.attr("r", 12)
.attr("id", function (d) {
return "Node;" + d.name;
})
.attr("class", "nodeStrokeClass")
.attr("fill", function(d) { return color(d.group); });
nodeEnter.append("svg:text")
.attr("class", "textClass")
.attr("x", 14)
.attr("y", ".31em")
.text(function (d) {
return d.name;
});
node.exit().remove();
force.on("tick", function () {
node.attr("transform", function (d) {
console.log(d);
return "translate(" + d.x + "," + d.y + ")";
});
});
// Restart the force layout.
force
.charge(-120)
.linkDistance( function(d) { return d.value * 10 } )
.size([width, height])
.start();
};
var a = graph.nodes[0];
var b = graph.nodes[1]
nodes.push(a);
update();
nodes.push(b);
update();
var c = {"source": findNode('a'), "target": findNode('b')}
// the line below causes the error
links.push(c);
update()
};
///
chart('body');
});
This is my data:
{
"nodes":[
{"name":"a", "group":1},
{"name":"b", "group":2},
{"name":"c", "group":3},
{"name":"d", "group":4},
{"name":"e", "group":5},
{"name":"f", "group":6},
{"name":"g", "group":7},
{"name":"h", "group":1},
{"name":"i", "group":2},
{"name":"j", "group":3},
{"name":"k", "group":4},
{"name":"l", "group":5},
{"name":"m", "group":6},
{"name":"n", "group":7}
],
"links":[
{"source":0,"target":1,"value":1},
{"source":2,"target":3,"value":1},
{"source":4,"target":5,"value":1},
{"source":7,"target":8,"value":1},
{"source":9,"target":10,"value":1},
{"source":11,"target":12,"value":1},
{"source":0,"target":5,"value":1},
{"source":1,"target":5,"value":1},
{"source":0,"target":6,"value":1},
{"source":1,"target":6,"value":1},
{"source":0,"target":7,"value":1},
{"source":1,"target":7,"value":1},
{"source":2,"target":8,"value":1},
{"source":3,"target":8,"value":1},
{"source":2,"target":9,"value":1},
{"source":3,"target":9,"value":1},
{"source":4,"target":11,"value":1},
{"source":5,"target":11,"value":1},
{"source":9,"target":12,"value":1},
{"source":10,"target":12,"value":1},
{"source":11,"target":13,"value":1},
{"source":12,"target":13,"value":1}
]
}

You have some basic problems with your code, see corrected concept below...
<!DOCTYPE html>
<html lang="en">
<head>
<meta charset="UTF-8">
<title></title>
<style>
.link {
stroke: #2E2E2E;
stroke-width: 2px;
}
.node {
stroke: #fff;
stroke-width: 2px;
}
.textClass {
stroke: #323232;
font-family: "Lucida Grande", "Droid Sans", Arial, Helvetica, sans-serif;
font-weight: normal;
stroke-width: .5;
font-size: 14px;
}
</style>
</head>
<body>
<!--<script src="d3 CB.js"></script>-->
<script src="https://cdnjs.cloudflare.com/ajax/libs/d3/3.5.5/d3.min.js"></script>
<script>
d3.json("data.json", function (error, graph) {
if (error) throw error;
function chart(elementName) {
// look for the node in the d3 layout
var findNode = function (name) {
for (var i in nodes) {
if (nodes[i]["name"] === name) return nodes[i];
}
};
var width = 960, // default width
height = 450, // default height
color = d3.scale.category10(),
nodes = graph.nodes,
links = graph.links,
force = d3.layout.force()
.nodes(nodes)
.links([]),
vis,
runOnceFlag = true;
vis = d3.select(elementName)
.append("svg:svg")
.attr("width", width)
.attr("height", height)
.attr("id", "svg")
.attr("pointer-events", "all")
.attr("viewBox", "0 0 " + width + " " + height)
.attr("perserveAspectRatio", "xMinYMid")
.append('svg:g');
var update = function () {
var link = vis.selectAll("line")
.data(force.links(), function (d) {
return d.source + "-" + d.target;
});
link.enter().insert("line", "g")
.attr("id", function (d) {
return d.source + "-" + d.target;
})
.attr("stroke-width", function (d) {
return d.value / 10;
})
.attr("class", "link")
.style("stroke", "red")
.transition().duration(5000).style("stroke", "black");
link.append("title")
.text(function (d) {
return d.value;
});
link.exit().remove();
var node = vis.selectAll("g.node")
.data(nodes, function (d) {
return d.name;
});
var nodeEnter = node.enter().append("g")
.attr("class", "node")
.call(force.drag);
nodeEnter.append("svg:circle")
.attr("r", 12)
.attr("id", function (d) {
return "Node;" + d.name;
})
.attr("class", "nodeStrokeClass")
.attr("fill", function (d) {
return color(d.group);
});
nodeEnter.append("svg:text")
.attr("class", "textClass")
.attr("x", 14)
.attr("y", ".31em")
.text(function (d) {
return d.name;
});
node.exit().remove();
force.on("tick", function () {
link.attr("x1", function (d) {
return d.source.x;
})
.attr("y1", function (d) {
return d.source.y;
})
.attr("x2", function (d) {
return d.target.x;
})
.attr("y2", function (d) {
return d.target.y;
});
node.attr("transform", function (d) {
console.log(d);
return "translate(" + d.x + "," + d.y + ")";
});
});
// Restart the force layout.
force
.charge(-120)
.linkDistance(function (d) {
return d.value * 100
})
.size([width, height])
.start();
};
update();
var c = {"source": findNode('a'), "target": findNode('b'), value: 1}
// the line below causes the error
window.setTimeout(function() {
force.links().push(c);
update()
},2000)
};
//
chart('body');
});
</script>
</body>
</html>

Related

How to transition linear gradient for a path

I'm working on a sankey diagram that updates whenever I change the filter (radiobuttons) using d3.js and a sankey-plugin. Now I'm trying to add a feature that, whenever I hover over one of the path, I append a linear gradient to the path going from the color of the source node to the color of the target node. If I don't use the filter everything works fine, however the gradient-coloring doesn't work if I apply the filter (colors are set wrong) because the links are transitioned. I think that I have to transition the linear-gradient somehow, but I don't understand how I have to do this.
I wrote a little script that shows the problem, before clicking the button colors are correct, and after it's messed up.
<!DOCTYPE html>
<html lang="en">
<head>
<meta charset="UTF-8">
<title>Title</title>
<script src="https://d3js.org/d3.v4.min.js"></script>
<script src="https://unpkg.com/d3-sankey#0.6"></script>
</head>
<body>
<svg id="diagram" height="150" width="600"></svg>
<button onclick="updateSankey()">Click Me!</button>
<style>
#diagram{
border: 1px solid black;
}
</style>
<script>
var target = 0;
var sankeyLinks;
var sankeyData = {nodes:[], links:[]};
calculateLinks();
initSankey();
updateSankey();
function initSankey() {
/*simple initialisation of the sankey, should explain itself*/
svg = d3.select("svg"),
width = +svg.attr("width"),
height = +svg.attr("height");
formatNumber = d3.format(",.0f"),
format = function (d) { return formatNumber(d) + " %"; },
color = d3.scaleOrdinal(d3.schemeCategory10);
sankey = d3.sankey()
.nodeWidth(15)
.nodePadding(10)
.extent([[1, 1], [width - 1, height - 6]])
.iterations(0);
t = d3.transition()
.duration(1500)
.ease(d3.easeLinear);
//set attributes for all links
titleGroup = svg.append("g")
.attr("class", "titles")
.attr("font-family", "sans-serif")
.attr("font-size", "150%");
diagram= svg.append("g")
.attr("class", "sankey")
// .attr("transform", "translate(" + marginleft + "," + margintop + ")");
linkGroup = diagram.append("g")
.attr("class", "links")
.attr("fill", "none");
//.attr("stroke", "#000")
//.attr("stroke-opacity", 0.2);
//set attributes for all nodes
nodeGroup = diagram.append("g")
.attr("class", "nodes")
.attr("font-family", "sans-serif")
.attr("font-size", 10);
}
function calculateLinks() {
if(target == 0)
{
target = 1;
sankeyLinks = [{source:0, target:1, value:5},{source:0, target:2, value:10},{source:0, target:3, value:15}];
}
else
{
target = 0;
sankeyLinks = [{source:0, target:2, value:15},{source:0, target:1, value:20},{source:0, target:3, value:10}];
}
}
function updateSankey() {
calculateLinks();
sankeyData.links = sankeyLinks;
sankeyData.nodes = [{name: "first"}, {name:"second"}, {name:"third"}, {name: "fourth"}];
sankey(sankeyData);
var links = linkGroup.selectAll('path')
.data(sankeyData.links);
//Set attributes for each link separately
links.enter().append("g")
.attr("id",function (d,i) {return "path"+i;})
.append("path")
.attr("stroke", "#000")
.attr("stroke-opacity", 0.15)
.attr("d", d3.sankeyLinkHorizontal())
.attr("stroke-width", function (d) {return Math.max(1, d.width); })
.on("mouseover",function (d,id) {
var pathGroup = svg.select('#path' + id);
var path = pathGroup.select("path");
path.attr("stroke","url(#grad"+id+")")
.attr("stroke-opacity","0.95");
})
.on("mouseout",function (d, id) {
pathGroup = svg.select('#path' + id);
var path = pathGroup.select("path");
path.attr("stroke","#000")
.attr("stroke-opacity","0.15");
})
.append("title")
.text(function (d) {
//tooltip info for the links
return d.source.name + " → " + d.target.name + "\n" + format(d.value); });
var pathGradient = svg.select(".links")
.selectAll("g")
.append("defs")
.append("linearGradient")
.attr("id",function (d, id) {
return "grad" + id;
})
//.attr("from", function () {return this.parentElement.parentElement.childNodes[0].getAttribute("from");})
//.attr("to", function () {return this.parentElement.parentElement.childNodes[0].getAttribute("to");})
.attr("gradientUnit","userSpaceOnUse")
.attr("style","mix-blend-mode: multiply;")
.attr("x1","0%")
.attr("x2","100%")
.attr("y1","0%")
.attr("y2","0%");
pathGradient.append("stop")
.attr("class","from")
.attr("offset","0%")
.attr("style", function (d) {
var color = setColor(d.source);
return "stop-color:" + color + ";stop-opacity:1";
});
pathGradient.append("stop")
.attr("class","to")
.attr("offset","100%")
.attr("style",function (d) {
var color = setColor(d.target);
return "stop-color:" + color + ";stop-opacity:1";
});
links.transition(t)
.attr("d", d3.sankeyLinkHorizontal())
.attr("stroke-width", function (d) { return Math.max(1, d.width); })
.select('title')
.text(function (d) {
//same argumentation as above, we need the method again for the transition
return d.source.name + " → " + d.target.name + "\n" + format(d.value); });
links.exit().remove();
var nodes = nodeGroup.selectAll('.node')
.data(sankeyData.nodes);
var nodesEnter = nodes.enter()
.append("g")
.attr('class', 'node');
//set attributes for each node separately
nodesEnter.append("rect")
.attr("x", function (d) { return d.x0; })
.attr("y", function (d) { return d.y0; })
.attr("height", function (d) { return d.y1 - d.y0; })
.attr("width", function (d) {
var width = d.x1 - d.x0;
return width;
})
.attr("fill", setColor)
.attr("stroke", "#000")
.attr("fill-opacity", 0.5)
//specify Pop-Up when hovering over node
nodesEnter.append("title")
.text(function (d) { return d.name + "\n" + format(d.value); });
//Update selection
var nodesUpdate = nodes.transition(t);
//same as the links we have to state the methods again in the update
nodesUpdate.select("rect")
.attr("y", function (d) { return d.y0; })
.attr("x", function (d) { return d.x0; })
.attr("height", function (d) { return d.y1 - d.y0; });
nodesUpdate.select("title")
.text(function (d) { return d.name + "\n" + format(d.value); });
//Exit selection
nodes.exit().remove();
}
function setColor(d) {
switch (d.name) {
case "first":
return "#f00";
case "second":
return "#ff0";
case "third":
return "#f0f";
case "fourth":
return "#0ff";
default:
return "#0f0";
}
}
</script>
</body>
</html>
After clicking the button once, the path from the red to the purple node has a linear gradient from red to yellow, even though I'd like it to go from red to purple.
I already realised, that I could write e.g. .iterations(15) instead of .iterations(0) in initSankey() to fix this. In the actual project I can't do this since I have to force the order of the nodes.
I hope I am clear enough in my explanation, if not, feel free to ask.
I would be extremely pleased if someone could tell me how to fix this problem.
PS. in this snippet the link on top disappears on hover, I have fixed this in the real project, here it's not a big deal.
Your issue was that the gradient urls were based on i, which could be different for a particular link with each update (ie, the order of the links may be different, so have a different i value); and data updates were not based on a constant unique id for a link.
In the snippet, I've added a unique name value for the links in the calculateLinks function, which is then used for the data joins and creating the def gradients, which means they remain constant with each update.
<!DOCTYPE html>
<html lang="en">
<head>
<meta charset="UTF-8">
<title>Title</title>
<script src="https://d3js.org/d3.v4.min.js"></script>
<script src="https://unpkg.com/d3-sankey"></script>
</head>
<body>
<svg id="diagram" height="150" width="600"></svg>
<button onclick="updateSankey()">Click Me!</button>
<style>
#diagram{
border: 1px solid black;
}
</style>
<script>
var target = 0;
var sankeyLinks;
var sankeyData = {nodes:[], links:[]};
calculateLinks();
initSankey();
updateSankey();
function initSankey() {
svg = d3.select("svg"),
width = +svg.attr("width"),
height = +svg.attr("height");
formatNumber = d3.format(",.0f"),
format = function (d) { return formatNumber(d) + " %"; },
sankey = d3.sankey()
.nodeWidth(15)
.nodePadding(10)
.size([width - 1, height - 6])
t = d3.transition()
.duration(1500)
.ease(d3.easeLinear);
//set attributes for all links
titleGroup = svg.append("g")
.attr("class", "titles")
.attr("font-family", "sans-serif")
.attr("font-size", "150%");
diagram= svg.append("g")
.attr("class", "sankey")
svg.append("defs")
linkGroup = diagram.append("g")
.attr("class", "links")
.attr("fill", "none");
//set attributes for all nodes
nodeGroup = diagram.append("g")
.attr("class", "nodes")
.attr("font-family", "sans-serif")
.attr("font-size", 10);
}
function calculateLinks() {
if(target == 0)
{
target = 1;
sankeyLinks = [
{name: "firstsecond",source:0, target:1, value:5},
{name: "firstthird",source:0, target:2, value:10},
{name: "firstfourth",source:0, target:3, value:15}];
}
else
{
target = 0;
sankeyLinks = [
{name: "firstthird", source:0, target:2, value:15},
{name: "firstsecond", source:0, target:1, value:20},
{name: "firstfourth", source:0, target:3, value:10}
];
}
}
function updateSankey() {
calculateLinks();
sankeyData.links = sankeyLinks;
sankeyData.nodes = [{name: "first"}, {name:"second"}, {name:"third"}, {name: "fourth"}];
sankey(sankeyData);
var pathGradient = svg.select("defs").selectAll("linearGradient")
.data(sankeyData.links, function(d){ return d.name })
.enter()
.append("linearGradient")
.attr("id",function (d) {
return "grad" + d.name;
})
.attr("gradientUnit","userSpaceOnUse")
.attr("x1","0%")
.attr("x2","100%")
.attr("y1","0%")
.attr("y2","0%");
pathGradient.append("stop")
.attr("class","from")
.attr("offset","0%")
.attr("style", function (d) {
var color = setColor(d.source);
return "stop-color:" + color;
});
pathGradient.append("stop")
.attr("class","to")
.attr("offset","100%")
.attr("style",function (d) {
var color = setColor(d.target);
return "stop-color:" + color;
});
var links = linkGroup.selectAll('path')
.data(sankeyData.links, function(d){ return d.name });
//Set attributes for each link separately
var linksenter = links.enter()
.append("g")
.attr("id",function (d) {return "path" + d.name;})
.append("path")
.style("stroke", "#000")
.style("stroke-opacity", 0.15)
.attr("stroke-width", function (d) {return Math.max(1, d.width); })
.on("mouseover",function (d) {
var pathGroup = svg.select('#path' + d.name);
var path = pathGroup.select("path");
path.style("stroke","url(#grad" + d.name + ")")
.style("stroke-opacity","0.95");
})
.on("mouseout",function (d, id) {
pathGroup = svg.select('#path' + d.source.name + d.target.name);
var path = pathGroup.select("path");
path.style("stroke","#000")
.style("stroke-opacity","0.15");
})
linksenter.merge(links).attr("d", d3.sankeyLinkHorizontal())
links.transition(t)
.attr("d", d3.sankeyLinkHorizontal())
.attr("stroke-width", function (d) { return Math.max(1, d.width); })
.select('title')
.text(function (d) {
return d.source.name + " → " + d.target.name + "\n" + format(d.value); });
var nodes = nodeGroup.selectAll('.node')
.data(sankeyData.nodes, function(d){ return d.name });
var nodesEnter = nodes.enter()
.append("g")
.attr('class', 'node');
nodesEnter.append("rect")
.attr("x", function (d) { return d.x0; })
.attr("y", function (d) { return d.y0; })
.attr("height", function (d) { return d.y1 - d.y0; })
.attr("width", function (d) {
var width = d.x1 - d.x0;
return width;
})
.attr("fill", setColor)
.attr("stroke", "#000")
.attr("fill-opacity", 0.5)
//specify Pop-Up when hovering over node
nodesEnter.append("title")
.text(function (d) { return d.name + "\n" + format(d.value); });
//Update selection
var nodesUpdate = nodes.transition(t);
//same as the links we have to state the methods again in the update
nodesUpdate.select("rect")
.attr("y", function (d) { return d.y0; })
.attr("x", function (d) { return d.x0; })
.attr("height", function (d) { return d.y1 - d.y0; });
nodesUpdate.select("title")
.text(function (d) { return d.name + "\n" + format(d.value); });
}
function setColor(d) {
switch (d.name) {
case "first":
return "#f00";
case "second":
return "#ff0";
case "third":
return "#f0f";
case "fourth":
return "#0ff";
default:
return "#0f0";
}
}
</script>
</body>
</html>

Gradually increment the opacity

I would like to increment gradually the opacity of my circle in D3.js. I have two problems, the first is even if I put a static opacity, my circles doesn't appears. The second is I don't know how to have a clean method to have a gradually apparition of my circles :
<!DOCTYPE html>
<meta charset="utf-8">
<style>
text {
font: 10px sans-serif;
}
</style>
<body>
<script src="https://d3js.org/d3.v3.min.js" charset="utf-8"></script>
<script>
var diameter = 960,
format = d3.format(",d"),
color = d3.scale.category20c();
var bubble = d3.layout.pack()
.sort(null)
.size([diameter,diameter])
.value(function(d) { console.log(d.size);return d.size; })
.padding(1.5);
var svg = d3.select("body").append("svg")
.attr("width", diameter)
.attr("height", diameter)
.attr("class", "bubble");
d3.json("./data.json", function(error, root) {
if (error) throw error;
var node = svg.selectAll(".node")
.data(bubble.nodes(classes(root))
.filter(function(d) { return !d.children; }))
.enter().append("g")
.attr("class", "node")
.attr("transform", function(d) { return "translate(" + d.x + "," + d.y + ")"; });
node.append("title")
.text(function(d) { return d.className + ": " + format(d.value); });
node.append("circle")
.attr("r", function(d) {return d.r; })
.style("fill", function(d) { return color(d.size); })
.style("visibility","hidden");
node.append("text")
.attr("dy", ".3em")
.style("text-anchor", "middle")
.text(function(d) { return d.className.substring(0, d.r / 3); })
.style("visibility","hidden");
setTimeout(myFunction, 3000);
function myFunction() {
for (var i = 0 ; i <= 1 ; i = i + 0.01){
console.log(i);
node.append("circle").style("opacity",i);
}
//At this time, circles should be appears !
}
});
// Returns a flattened hierarchy containing all leaf nodes under the root.
function classes(root) {
var classes = [];
function recurse(name, node) {
if (node.children) node.children.forEach(function(child) { recurse(node.name, child); });
else classes.push({packageName: name, className: node.name, value: node.size, size: node.size});
}
recurse(null, root);
return {children: classes};
}
d3.select(self.frameElement).style("height", diameter + "px");
</script>
</body>
This is the Plunker : https://plnkr.co/edit/wrCk54GrDPpK8AkgWjCt?p=preview
Thanks.
Here's the result:
https://plnkr.co/edit/SAf0BaUpJJQw5Vwp3T5P?p=preview
I think rather than visibility you want opacity for your circle and text elements like this:
node.append("circle")
.attr("r", function(d) {return d.r; })
.style("fill", function(d) { return color(d.size); })
.style("opacity","0");
node.append("text")
.attr("dy", ".3em")
.style("text-anchor", "middle")
.text(function(d) { return d.className.substring(0, d.r / 3); })
.style("opacity","0");
And your setTimeout callback should be:
function myFunction() {
node.selectAll("circle").transition().duration(1000).style("opacity","1");
node.selectAll("text").transition().duration(1000).style("opacity","1");
}
You can change the duration above for a slower effect.

D3 Appending HTML to Nodes

I have looked for answer to this but none of the similar questions help me in my situation. I have a D3 tree that creates new nodes at runtime. I would like to add HTML (so I can format) to a node when I mouseover that particular node. Right now I can add HTML but its unformatted. Please help!
JSFiddle: http://jsfiddle.net/Srx7z/
JS Code:
var width = 960,
height = 500;
var tree = d3.layout.tree()
.size([width - 20, height - 60]);
var root = {},
nodes = tree(root);
root.parent = root;
root.px = root.x;
root.py = root.y;
var diagonal = d3.svg.diagonal();
var svg = d3.select("body").append("svg")
.attr("width", width)
.attr("height", height)
.append("g")
.attr("transform", "translate(-30,40)");
var node = svg.selectAll(".node"),
link = svg.selectAll(".link");
var duration = 750;
$("#submit_button").click(function() {
update();
});
function update() {
if (nodes.length >= 500) return clearInterval(timer);
// Add a new node to a random parent.
var n = {id: nodes.length},
p = nodes[Math.random() * nodes.length | 0];
if (p.children) p.children.push(n); else p.children = [n];
nodes.push(n);
// Recompute the layout and data join.
node = node.data(tree.nodes(root), function (d) {
return d.id;
});
link = link.data(tree.links(nodes), function (d) {
return d.source.id + "-" + d.target.id;
});
// Add entering nodes in the parent’s old position.
var gelement = node.enter().append("g");
gelement.append("circle")
.attr("class", "node")
.attr("r", 20)
.attr("cx", function (d) {
return d.parent.px;
})
.attr("cy", function (d) {
return d.parent.py;
});
// Add entering links in the parent’s old position.
link.enter().insert("path", ".g.node")
.attr("class", "link")
.attr("d", function (d) {
var o = {x: d.source.px, y: d.source.py};
return diagonal({source: o, target: o});
})
.attr('pointer-events', 'none');
node.on("mouseover", function (d) {
var g = d3.select(this);
g.append("text").html('First Line <br> Second Line')
.classed('info', true)
.attr("x", function (d) {
return (d.x+20);
})
.attr("y", function (d) {
return (d.y);
})
.attr('pointer-events', 'none');
});
node.on("mouseout", function (d) {
d3.select(this).select('text.info').remove();
});
// Transition nodes and links to their new positions.
var t = svg.transition()
.duration(duration);
t.selectAll(".link")
.attr("d", diagonal);
t.selectAll(".node")
.attr("cx", function (d) {
return d.px = d.x;
})
.attr("cy", function (d) {
return d.py = d.y;
});
}
Using Lars Kotthoff's excellent direction, I got it working so I decided to post it for others and my own reference:
http://jsfiddle.net/FV4rL/2/
with the following code appended:
node.on("mouseover", function (d) {
var g = d3.select(this); // The node
var div = d3.select("body").append("div")
.attr('pointer-events', 'none')
.attr("class", "tooltip")
.style("opacity", 1)
.html("FIRST LINE <br> SECOND LINE")
.style("left", (d.x + 50 + "px"))
.style("top", (d.y +"px"));
});

D3.js how do I arrange nodes of a force layout to be on a circle

I have developed a force layout to represent relationships between social groups. Now I would like to get the nodes to be distributed in a circle with links joining them. What is the best way to do this?
The complete version of the code (without data) is here http://jsfiddle.net/PatriciaW/zZSJT/
(Why do I have to include code here too? Here is the main portion)
d3.json("/relationships?nocache=" + (new Date()).getTime(),function(error,members){
var links=members.organizations.map(function(members) {
return members.member;
});
var nodes = {};
links.forEach(function(link) {
link.source = nodes[link.xsource] || (nodes[link.xsource] = {source: link.xsource, name: link.xsource, category: link.categorysource, path: link.pathsource, desc: link.descsource, title: link.titlesource});
link.target = nodes[link.xtarget] || (nodes[link.xtarget] = {target: link.xtarget, name: link.xtarget, category: link.categorytarget, path: link.pathtarget, desc: link.desctarget, title: link.titletarget});
});
force = d3.layout.force()
.nodes(d3.values(nodes))
.links(links)
.size([width, height])
.charge(-120)
.linkDistance(function() {return (Math.random() * 200) + 100;})
.linkStrength(0.5)
.on("tick", tick)
.start();
var link = svg.selectAll(".link")
.data(force.links())
.enter().append("line")
.attr("class", "link");
var node_drag = d3.behavior.drag()
.on("dragstart", dragstart)
.on("drag", dragmove)
.on("dragend", dragend);
var loading = svg.append("text")
.attr("x", width / 2)
.attr("y", height / 2)
.attr("dy", ".35em")
.style("text-anchor", "middle")
.text("Simulating. One moment please…");
function dragstart(d, i) {
force.stop() // stops the force auto positioning before you start dragging
}
function dragmove(d, i) {
d.px += d3.event.dx;
d.py += d3.event.dy;
d.x += d3.event.dx;
d.y += d3.event.dy;
tick(); // this is the key to make it work together with updating both px,py,x,y on d !
}
function dragend(d, i) {
d.fixed = true; // of course set the node to fixed so the force doesn't include the node in its auto positioning stuff
tick();
force.resume();
};
var node = svg.selectAll(".node")
.data(force.nodes())
.enter().append("g")
.attr("class", "node")
.on("mouseover", mouseover)
.on("mouseout", mouseout)
.on("click", clickAlert)
.call(node_drag);
node.append("circle")
.attr("r", 8)
.style("fill", function(d) {
return categoryColour [d.category];
})
// add an image marker
node.append("image")
.attr("x",-8)
.attr("y",-8)
.attr("width", 16)
.attr("height", 16)
.attr("xlink:href", function(d) {
return categoryImage [d.category]
})
.on("click", clickAlert)
.style("cursor", "pointer")
node.append("text")
.attr("x", 12)
.attr("dy", ".35em")
.text(function(d) {
return d.name;
});
// Use a timeout to allow the rest of the page to load first.
setTimeout(function() {
// Run the layout a fixed number of times.
// The ideal number of times scales with graph complexity.
force.start();
for (var i = n * n; i > 0; --i) force.tick();
force.stop();
svg.selectAll("line")
.data(links)
.enter().append("line")
.attr("x1", function(d) { return d.source.x; })
.attr("y1", function(d) { return d.source.y; })
.attr("x2", function(d) { return d.target.x; })
.attr("y2", function(d) { return d.target.y; });
svg.selectAll("circle")
.data(nodes)
.enter().append("circle")
.attr("cx", function(d) { return d.x; })
.attr("cy", function(d) { return d.y; })
.attr("r", 4.5);
loading.remove();
}, 10);
function tick() {
link
.attr("x1", function(d) {
return d.source.x + xadj; })
.attr("y1", function(d) {
return d.source.y + yadj; })
.attr("x2", function(d) {
return d.target.x +xadj; })
.attr("y2", function(d) {
return d.target.y +yadj; });
node
.attr("transform", function(d) {
return "translate(" + (d.x + xadj) + "," + (d.y + yadj) + ")";
});
};
function mouseover() {
d3.select(this).select("circle").transition()
.duration(750)
.attr("r", 16);
d3.select(this).select("text")
.attr("font-size","34px")
.style("font-weight", "bold");
};
function mouseout() {
d3.select(this).select("circle").transition()
.duration(750)
.attr("r", 8);
d3.select(this).select("text")
.attr("font-size","12px")
.style("font-weight", "normal");
};
}) // end json
Here's someone else's solution:
This network graph uses the D3 force layout to draw nodes and links, but instead of using d3.force() to find the best node positions, we draw an invisible arc and evenly places nodes along the circumference.
<!DOCTYPE html>
<html>
<head>
<script src="http://d3js.org/d3.v3.min.js"></script>
<meta charset="utf-8">
<title>JS Bin</title>
<style>
line.node-link, path.node-link {
fill: none;
stroke: black
}
circle.node {
fill: white;
stroke: black
}
circle.node+text {
text-anchor: middle;
}
text {
font-family: sans-serif;
pointer-events: none;
}
</style>
</head>
<body>
<script type="text/javascript">
// number of random nodes (gets crowded at >25 unless you change node diameter)
var num = 20;
// returns random int between 0 and num
function getRandomInt() {return Math.floor(Math.random() * (num));}
// nodes returns a [list] of {id: 1, fixed:true}
var nodes = d3.range(num).map(function(d) { return {id: d}; });
// links returns a [list] of {source: 0, target: 1} (values refer to indicies of nodes)
var links = d3.range(num).map(function(d) { return {source: getRandomInt(), target: getRandomInt()}; });
var width = 500,
height = 500;
var force = d3.layout.force()
.nodes(nodes)
.links(links)
.size([width, height]);
// evenly spaces nodes along arc
var circleCoord = function(node, index, num_nodes){
var circumference = circle.node().getTotalLength();
var pointAtLength = function(l){return circle.node().getPointAtLength(l)};
var sectionLength = (circumference)/num_nodes;
var position = sectionLength*index+sectionLength/2;
return pointAtLength(circumference-position)
}
// fades out lines that aren't connected to node d
var is_connected = function(d, opacity) {
lines.transition().style("stroke-opacity", function(o) {
return o.source === d || o.target === d ? 1 : opacity;
});
}
var svg = d3.select("body").append("svg")
.attr("width", width)
.attr("height", height);
// invisible circle for placing nodes
// it's actually two arcs so we can use the getPointAtLength() and getTotalLength() methods
var dim = width-80
var circle = svg.append("path")
.attr("d", "M 40, "+(dim/2+40)+" a "+dim/2+","+dim/2+" 0 1,0 "+dim+",0 a "+dim/2+","+dim/2+" 0 1,0 "+dim*-1+",0")
.style("fill", "#f5f5f5");
force.start();
// set coordinates for container nodes
nodes.forEach(function(n, i) {
var coord = circleCoord(n, i, nodes.length)
n.x = coord.x
n.y = coord.y
});
// use this one for straight line links...
// var lines = svg.selectAll("line.node-link")
// .data(links).enter().append("line")
// .attr("class", "node-link")
// .attr("x1", function(d) { return d.source.x; })
// .attr("y1", function(d) { return d.source.y; })
// .attr("x2", function(d) { return d.target.x; })
// .attr("y2", function(d) { return d.target.y; });
// ...or use this one for curved line links
var lines = svg.selectAll("path.node-link")
.data(links).enter().append("path")
.attr("class", "node-link")
.attr("d", function(d) {
var dx = d.target.x - d.source.x,
dy = d.target.y - d.source.y,
dr = Math.sqrt(dx * dx + dy * dy);
return "M" +
d.source.x + "," +
d.source.y + "A" +
dr + "," + dr + " 0 0,1 " +
d.target.x + "," +
d.target.y;
});
var gnodes = svg.selectAll('g.gnode')
.data(nodes).enter().append('g')
.attr("transform", function(d) {
return "translate("+d.x+","+d.y+")"
})
.classed('gnode', true);
var node = gnodes.append("circle")
.attr("r", 25)
.attr("class", "node")
.on("mouseenter", function(d) {
is_connected(d, 0.1)
node.transition().duration(100).attr("r", 25)
d3.select(this).transition().duration(100).attr("r", 30)
})
.on("mouseleave", function(d) {
node.transition().duration(100).attr("r", 25);
is_connected(d, 1);
});
var labels = gnodes.append("text")
.attr("dy", 4)
.text(function(d){return d.id})
</script>
</body>
</html>

D3, SVG, and Javascript : Need to assign unique images to dynamically created nodes

I'm playing with the following Javascript + SVG + D3 code.
http://bl.ocks.org/1095795
The code is here:
https://gist.github.com/1095727
In short, I need unique images for each node (instead of the duplicated smiley face image as it's pulling now), but I'm not savvy enough to make it happen. Any help would be appreciated.
<!DOCTYPE html>
<html>
<head>
<script type="text/javascript" src="http://mbostock.github.com/d3/d3.js"></script>
<script type="text/javascript" src="http://mbostock.github.com/d3/d3.layout.js"></script>
<script type="text/javascript" src="http://mbostock.github.com/d3/d3.geom.js"></script>
<style type="text/css">
.link { stroke: #ccc; }
.nodetext { pointer-events: none; font: 10px sans-serif; }
</style>
</head>
<body>
<script type="text/javascript">
var w = 960,
h = 500
var nodes = [],
links = [];
var vis = d3.select("body").append("svg:svg")
.attr("width", w)
.attr("height", h);
var force = self.force = d3.layout.force()
.nodes(nodes)
.links(links)
.gravity(.05)
.distance(100)
.charge(-100)
.size([w, h]);
force.on("tick", function() {
var node = vis.selectAll("g.node")
.data(nodes, function(d) { return d.id;} )
var link = vis.selectAll("line.link")
.data(links, function(d) { return d.source.id + ',' + d.target.id})
link.attr("x1", function(d) { return d.source.x; })
.attr("y1", function(d) { return d.source.y; })
.attr("x2", function(d) { return d.target.x; })
.attr("y2", function(d) { return d.target.y; });
node.attr("transform", function(d) { return "translate(" + d.x + "," + d.y + ")"; });
});
function recalc() {
var link = vis.selectAll("line.link")
.data(links, function(l) { return l.source.id + '-' + l.target.id; });
link.enter().append("svg:line")
.attr("class", "link")
.attr("x1", function(d) { return d.source.x; })
.attr("y1", function(d) { return d.source.y; })
.attr("x2", function(d) { return d.target.x; })
.attr("y2", function(d) { return d.target.y; });
link.exit().remove();
var node = vis.selectAll("g.node")
.data(nodes, function(d) { return d.dpid;}).call(force.drag);
var nodeEnter = node.enter().append("svg:g")
.attr("class", "node")
.call(force.drag);
nodeEnter.append("svg:image")
.attr("class", "circle")
.attr("xlink:href", "https://d3nwyuy0nl342s.cloudfront.net/images/icons/public.png")
.attr("x", "-8px")
.attr("y", "-8px")
.attr("width", "16px")
.attr("height", "16px");
nodeEnter.append("svg:text")
.attr("class", "nodetext")
.attr("dx", 12)
.attr("dy", ".35em")
.text(function(d) { return d.id });
node.exit().remove();
force.start();
}
/* Scenario */
/* step 1: add three nodes and three links */
function step1() {
var nA = {id: 'aaa'};
var nB = {id: 'bbb'};
var nC = {id: 'ccc'};
nodes.push(nA);
nodes.push(nB);
nodes.push(nC);
var lAB = {source: nA, target: nB};
var lAC = {source: nA, target: nC};
var lBC = {source: nB, target: nC};
links.push(lAB );
links.push(lAC);
links.push(lBC);
recalc();
}
/* step 2: node B disappears with links */
function step2() {
nodes = nodes.filter(function(n) { return n.id !== 'bbb'; });
links = links.filter(function(l) { return (l.source.id !== 'bbb' && l.target.id !== 'bbb'); });
recalc();
}
/* step 3: node B reappears with links */
function step3() {
var nB = {id: 'bbb'};
nodes.push(nB);
/* find exiting nodes for links */
var nA = nodes.filter(function(n) { return n.id === 'aaa'; })[0];
var nC = nodes.filter(function(n) { return n.id === 'ccc'; })[0];
var lAB = {source: nA, target: nB};
var lBC = {source: nB, target: nC};
links.push(lAB);
links.push(lBC);
recalc();
}
window.setTimeout(step1, 2000);
window.setTimeout(step2, 4000);
window.setTimeout(step3, 6000);
force.start();
recalc();
</script>
</body>
</html>
It looks like you're trying to add a different image for each node, instead of the one image added here:
nodeEnter.append("svg:image")
.attr("class", "circle")
.attr("xlink:href", "https://d3nwyuy0nl342s.cloudfront.net/images/icons/public.png")
This adds the image at node creation time, which sounds like it would be sufficient for your purposes. All you need to do is supply a function instead of a string for the relevant .attr() call. If you had an array of image URLs to use, you could get them in sequence like this:
nodeEnter.append("svg:image")
.attr("class", "circle")
.attr("xlink:href", function(d, i) {
// d is the node data, i is the index of the node
return myImages[i];
})
or, if you had image URLs in the node data itself:
nodeEnter.append("svg:image")
.attr("class", "circle")
.attr("xlink:href", function(d, i) {
// d is the node data, i is the index of the node
return d.nodeImageUrl;
})

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